Basic Information

 

 

Xiayu Xu

Associate Professor

Contact

Office:

School of Life Science and Technology

Xi'an Jiaotong University

No.28 Wst Xianning Rd.,

Xi'an Shaanxi, P.R.China

Email:

xiayuxu@xjtu.edu.cn

Positions

07/2016- 

Associate Professor

Xi'an Jiaotong University

08/2013-07/2016

Assistant Professor

Xi'an Jiaotong University

06/2012-07-2013

Postdoc Researcher

Iowa Institute of Biomedical Imaging

Education

06/2010-05/2012

Ph.D.

The University of Iowa

08/2008-05/2010

M.S.

The University of Iowa

09/2004-07/2008

B.S.

Xi'an Jiaotong University

Scientific Research

  • Xiayu Xu, Zhanfeng Xiao, Fan Zhang, Changxiang Wang, Bo Wei, Yaohui Wang, Bo Cheng, Yuanbo Jia, Yuan Li, Bin Li, Hui Guo, Feng Xu, “CellVisioner: A Generalizable Cell Virtual Staining Toolbox based on Few-Shot Transfer Learning for Mechanobiological Analysis,” Research, 6:0285, 2023, DOI: 10.34133/research.02
  • Xiayu Xu, Peiwei Yang, Hualin Wang, Zhanfeng Xiao, Gang Xing, Xiulan Zhang, Wei Wang, Feng Xu, Jiong Zhang, Jianqin Lei, “AV-casNet: Fully Automatic Arteriole-Venule Segmentation and Differentiation in OCT Angiography,” IEEE Transactions on Medical Imaging, 42(2): 481-492, 2023, DOI: 10.1109/TMI.2022.3214291.  [code][data:XJTU-OCTA]
  • Chaoyu Cao, Minli You*, Haoyang Tong, Zhenrui Xue, Chang Liu, Wanghong He, Ping Peng, Chunyan Yao, Ang Li, Xiayu Xu, Feng Xu*,Similar Colors Analysis based on Deep Learning (SCAD) for Multiplex Digital PCR via Single Fluorescent Channel, Lab on a Chip, 2022
  • Hualin Wang, Yuhong Zhou, Jiong Zhang, Jianqin Lei, Dongke Sun, Feng Xu, Xiayu Xu*, “Anomaly Segmentation in Retinal Images with Poisson-Blending Data Augmentation,” Medical Image Analysis, 81:102534, 2022, DOI: 10.1016/j.media.2022.102534  [code]
  • Gang Xing#, Li Chen#, Hualin Wang, Jiong Zhang, Dongke Sun, Feng Xu, Jianqin Lei*, Xiayu Xu*, “Multi-scale pathological fluid segmentation in OCT with a novel curvature loss in convolutional neural network,” IEEE Transactions on Medical Imaging, 41(6): 1547-1559, 2022, DOI: 10.1109/TMI.2022.3142048
  • Xiayu Xu, Bin Gao, Wenxiang Ding, Qiong Wang, Maiye Zhang, Tao Tan, Fei Sun, Jianqin Lei, Qiuhe Ji*, Feng Xu*, “Retinal image measurements and their association with chronic kidney disease in Chinese patients with type 2 diabetes: the NCD study,” Acta Diabetologica, 58:363–370, 2021, DOI: 10.1007/s00592-020-01621-6
  • Qiong Wang, Aili Yang, Fei Sun, Maiye Zhang, Xiayu Xu*, Bin Gao*, "Correlation between retinal vascular parameters in patients with type 2 diabetes," , Acta Diabetologica, 2021. DOI: 10.1007/s00592-021-01741-7
  • 杨培伟，周余红，邢岗，田智强，许夏瑜*，卷积神经网络在生物医学图像分析中的应用进展，计算机工程与应用，57(7): 44-58，2021
  • Jianqin Lei*, Xiayu Xu, Li Chen, Xiaojuan Fan, Nizar Saleh Abdelfattah, “Dilated retinal large vessels and capillaries associated with diabetic macular edema and photoreceptor loss respectively,” Graefe's Archive for Clinical and Experimental Ophthalmology, 2021, DOI: 10.1007/s00417-020-05039-2
  • Xiayu Xu, Fei Sun, Qiong Wang, Maiye Zhang, Wenxiang Ding, Aili Yang, Bin Gao*, “Comprehensive retinal vascular measurements: a novel association with renal function in type 2 diabetic patients in China,” Scientific Reports, 10(1), 2020, DOI: 10.1038/s41598-020-70408-0
  • Zhiqiang Tian*, Yaoyue Zheng, Xiaojian Li, Shaoyi Du, Xiayu Xu, “Graph convolutional network based optic disc and cup segmentation on fundus images,” Biomedical Optics Express, 11(6): 3043-3057, 2020, DOI: 10.1364/BOE.390056
  • Xiayu Xu, Cheng Chen, Wenxiang Ding, Peiwei Yang, Huiqin Lu, Feng Xu, Jianqin Lei*, “Automated quantification of superficial retinal capillaries and large vessels for diabetic retinopathy on optical coherence tomographic angiography,” Journal of Biophotonics, 12(11):1-8, 2019, DOI: 10.1002/jbio.201900103
  • Xiayu Xu, Xuemin Wang, Jie Hu, Yang Gong, Lin Wang, Wan Zhou, XiuJun Li, Feng Xu*, “A smartphone-based on-site nucleic acid testing platform at point-of-care settings,” Electrophoresis, 40: 914-921, 2019, DOI: 10.1002/elps.201800449
  • Chan Wen, Cheng Pei*, Xiayu Xu, Jianqin Lei*, “Influence of axial length on parafoveal and peripapillary metrics from swept source optical coherence tomography angiography,” Current Eye Research, 44(9): 980-986, 2019, DOI: 10.1080/02713683.2019.1607393
  • Peilin Lv, Jingni Yu, Xiayu Xu, Tianjian Lu*, Feng Xu*, “Eriodictyol inhibits high glucose-induced oxidative stress and inflammation in retinal ganglial cells,” Journal of Cellular Biochemistry, 120(4):5644-5651, 2019, DOI: 10.1002/jcb.27848
  • Xiayu Xu, Rendong Wang, Peilin Lv, Bin Gao, Chan Li, Zhiqiang Tian, Tao Tan, Feng Xu*, “Simultaneous arteriole and venule segmentation with domain-specific loss function on a new public database,” Biomedical Optics Express, 9(7):1-14, 2018, DOI: 10.1364/boe.9.003153 [data: REVEAL]
  • Dongsheng Jiang, Weiqiang Dou, Luc Vosters, Xiayu Xu, Yue Sun, Tao Tan*, “Denoising of 3D magnetic resonance images with multichannel,” Japanese Journal of Radiology, 36(9):566-574, 2018, DOI: 10.1007/s11604-018-0758-8
  • Jianqin Lei, Enhui Yi, Yan Suo, Cheng Chen, Xiayu Xu, Wenxiang Ding, Nizar Saleh Abdelfattah, Xiaojuan Fan, Huiqin Lu*, “Distinctive analysis of macular superficial capillaries and large vessels using optical coherence tomographic angiography in healthy and diabetic eyes,” Investigative Ophthalmology &Visual Science, 59(5):1937-1943, 2018, DOI: 10.1167/iovs.17-23676
  • Xiayu Xu, Wenxiang Ding, Michael D. Abramoff, Ruofan Cao*, “An improved arteriovenous classification method for the early diagnostics of various diseases in retinal image,” Computer Methods and Programs in Biomedicine, 141: 3-9, 2017, DOI: 10.1016/j.cmpb.2017.01.007
  • 李聪慧，曹若凡，许夏瑜，李菲，张镇西，徐峰，无透镜显微成像技术在即时检测中的应用进展，中国激光，2017，DOI: 10.3788/CJL201845.0207018
  • Xiayu Xu, Wenxiang Ding, Xuemin Wang, Ruofan Cao, Maiye Zhang, Peilin Lv, Feng Xu*, “Smartphone-based accurate analysis of retinal vasculature towards point-of-care diagnostics,” Scientific Reports, 6(34603), 2016, DOI: 10.1038/srep34603
  • Jie Hu, Xingye Cui, Yan Gong, Xiayu Xu, Bin Gao, Ting Wen, Tian Jian Lu, Feng Xu*, “Portable microfluidic and smartphone-based devices for monitoring of cardiovascular diseases at the point of care,” Biotechnology Advances, 34(3):305-320, 2016, DOI: 10.1016/j.biotechadv.2016.02.008
  • 曹雷，许夏瑜，高彬，李世超，文婷，李莹辉，卢天健，徐峰，绝对定量的多聚酶链式反应技术的发展现状及其生物医学应用，中国科学:生命科学（Science China: Life Science），46:809–826，2016
  • Xiayu Xu, Kyungmoo Lee, Li Zhang, Milan Sonka, Michael D. Abràmoff*, “Stratified sampling voxel classification for segmentation of intraretinal and subretinal fluid in longitudinal clinical OCT data,” IEEE Transactions on Medical Imaging, 34(7): 1616-1623, 2015, DOI: 10.1109/TMI.2015.2408632
  • Xiayu Xu, Altug Akay, Huilin Wei, Shuqi Wang, Belinda Pingguan-Murphy, Björn-Erik Erlandsson, XiuJun Li, Won Gu Lee, Jie Hu, Lin Wang, Feng Xu*, “Advances in smartphone-based point-of-care diagnostics,” Proceedings of the IEEE, 103(2): 236-247, 2015, DOI: 10.1109/JPROC.2014.2378776
  • Xiayu Xu, Joseph M. Reinhardt, Qiao Hu, Benjamin Bakall, Paul S. Tlucek, Geir Bertelsen, and Michael D. Abràmoff, “Retinal Vessel Width Measurement at Branchings using An Improved Electric Field Theory-Based Graph Approach,” PLoS ONE, 7(11): e49668, 2012
  • Xiayu Xu, Meindert Niemeijer, Qi Song, Milan Sonka, Mona K. Garvin, Joseph M. Reinhardt, Michael D. Abràmoff, “Vessel Boundary Delineation on Fundus Images using Graph-Based Approach,” IEEE Trans. on Medical Imaging, 30(6): 1184-91, 2011
  • Meindert Niemeijer, Xiayu Xu, Alina V. Dumitrescu, Priya Gupta, Bram van Ginneken, James C. Folk, Michael D. Abràmoff, “Automated Measurement of the Arteriolar-to-Venular Width Ratio in Digital Color Fundus Photographs,” IEEE Trans. on Medical Imaging, 30(11): 1941-50, 2011