Team Members

 

许夏瑜，副教授

 

Contact Information

通讯地址：

陕西省西安市

中国西部创新港#18-4063

邮编：

710049

邮箱：

xiayuxu@xjtu.edu.cn

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诚挚邀请有志于从事人工智能和机器视觉在生物医学领域应用的青年学子报考硕士生和博士生。我们不仅注重科学研究的前沿性、原创性、应用性，同时更关注学生研究能力的培养，以及学生未来的职业发展！

 

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博士，西安交通大学生命科学与技术学院副教授，陕西省计算机学会生物医学智能计算专业委员会委员、陕西省抗癌协会肿瘤影像专业委员会青年委员会常务委员、智慧医疗组副主任委员。2008年本科毕业于西安交通大学，2012年毕业于美国爱荷华大学（University of Iowa）获哲学博士学位，2012-2013年于爱荷华大学医学影像研究中心任博士后研究员。2013年至今在西安交通大学先后任助理教授、副教授。主要讲授本科生课程《数据结构与算法》、《医学智能诊断》和研究生课程《医学人工智能》等。

 

致力于机器视觉技术在医学影像的智能分析中的应用研究，具体研究课题包括基于眼底图像的糖尿病视网膜病变等的检测、基于三维OCT图像的眼底增龄性黄斑病变的诊断、基于便携眼底照相机和智能手机的糖尿病视网膜病变早筛等。先后主持国家级和省部级项目5项，并作为骨干成员参与国家重大仪器开发专项，以第一/通讯作者在IEEE Trans. on Medical Imaging, Medical Image Analysis, Proceedings of IEEE等国际知名学术期刊和会议发表论文30余篇，获授权美国发明专利1项、国家发明专利4项，软件著作权3项等。

Educational Experience

06/2010-05/2012

博士

University of Iowa，生物医学工程

08/2008-05/2010

硕士

University of Iowa，生物医学工程

09/2004-07/2008

本科

西安交通大学，生物医学工程

Work Experience

07/2016-至今 

副教授

 西安交通大学 生命科学与技术学院

08/2013-07/2016

讲   师

西安交通大学 生命科学与技术学院

06/2012-06/2013

博士后

爱荷华医学影像研究中心

Main Responsibility

陕西省计算机学会生物医学智能计算专业委员会委员

陕西省抗癌协会肿瘤影像专业委员会青年委员会常务委员

《Sensors》客座编辑

MICS2021、KBEI2019、KBEI2017等会议执行委员

20余个国际/国内权威期刊独立审稿人

教育部学位与研究生教育发展中心硕士学位论文通讯评议专家

(5.)Scientific Research

  • Xiayu Xu, Zhanfeng Xiao, Fan Zhang, Changxiang Wang, Bo Wei, Yaohui Wang, Bo Cheng, Yuanbo Jia, Yuan Li, Bin Li, Hui Guo, Feng Xu, “CellVisioner: A Generalizable Cell Virtual Staining Toolbox based on Few-Shot Transfer Learning for Mechanobiological Analysis,” Research, 6:0285, 2023, DOI: 10.34133/research.02 [PDF]
  • Xiayu Xu, Peiwei Yang, Hualin Wang, Zhanfeng Xiao, Gang Xing, Xiulan Zhang, Wei Wang, Feng Xu, Jiong Zhang, Jianqin Lei, “AV-casNet: Fully Automatic Arteriole-Venule Segmentation and Differentiation in OCT Angiography,” IEEE Transactions on Medical Imaging, 42(2): 481-492, 2023, DOI: 10.1109/TMI.2022.3214291.  [code][data:XJTU-OCTA][PDF]
  • Chaoyu Cao, Minli You*, Haoyang Tong, Zhenrui Xue, Chang Liu, Wanghong He, Ping Peng, Chunyan Yao, Ang Li, Xiayu Xu, Feng Xu*,Similar Colors Analysis based on Deep Learning (SCAD) for Multiplex Digital PCR via Single Fluorescent Channel, Lab on a Chip, 2022
  • Hualin Wang, Yuhong Zhou, Jiong Zhang, Jianqin Lei, Dongke Sun, Feng Xu, Xiayu Xu*, “Anomaly Segmentation in Retinal Images with Poisson-Blending Data Augmentation,” Medical Image Analysis, 81:102534, 2022, DOI: 10.1016/j.media.2022.102534  [code]
  • Gang Xing#, Li Chen#, Hualin Wang, Jiong Zhang, Dongke Sun, Feng Xu, Jianqin Lei*, Xiayu Xu*, “Multi-scale pathological fluid segmentation in OCT with a novel curvature loss in convolutional neural network,” IEEE Transactions on Medical Imaging, 41(6): 1547-1559, 2022, DOI: 10.1109/TMI.2022.3142048
  • Xiayu Xu, Bin Gao, Wenxiang Ding, Qiong Wang, Maiye Zhang, Tao Tan, Fei Sun, Jianqin Lei, Qiuhe Ji*, Feng Xu*, “Retinal image measurements and their association with chronic kidney disease in Chinese patients with type 2 diabetes: the NCD study,” Acta Diabetologica, 58:363–370, 2021, DOI: 10.1007/s00592-020-01621-6
  • Qiong Wang, Aili Yang, Fei Sun, Maiye Zhang, Xiayu Xu*, Bin Gao*, "Correlation between retinal vascular parameters in patients with type 2 diabetes," , Acta Diabetologica, 2021. DOI: 10.1007/s00592-021-01741-7
  • 杨培伟，周余红，邢岗，田智强，许夏瑜*，卷积神经网络在生物医学图像分析中的应用进展，计算机工程与应用，57(7): 44-58，2021
  • Jianqin Lei*, Xiayu Xu, Li Chen, Xiaojuan Fan, Nizar Saleh Abdelfattah, “Dilated retinal large vessels and capillaries associated with diabetic macular edema and photoreceptor loss respectively,” Graefe's Archive for Clinical and Experimental Ophthalmology, 2021, DOI: 10.1007/s00417-020-05039-2
  • Xiayu Xu, Fei Sun, Qiong Wang, Maiye Zhang, Wenxiang Ding, Aili Yang, Bin Gao*, “Comprehensive retinal vascular measurements: a novel association with renal function in type 2 diabetic patients in China,” Scientific Reports, 10(1), 2020, DOI: 10.1038/s41598-020-70408-0
  • Zhiqiang Tian*, Yaoyue Zheng, Xiaojian Li, Shaoyi Du, Xiayu Xu, “Graph convolutional network based optic disc and cup segmentation on fundus images,” Biomedical Optics Express, 11(6): 3043-3057, 2020, DOI: 10.1364/BOE.390056
  • Xiayu Xu, Cheng Chen, Wenxiang Ding, Peiwei Yang, Huiqin Lu, Feng Xu, Jianqin Lei*, “Automated quantification of superficial retinal capillaries and large vessels for diabetic retinopathy on optical coherence tomographic angiography,” Journal of Biophotonics, 12(11):1-8, 2019, DOI: 10.1002/jbio.201900103
  • Xiayu Xu, Xuemin Wang, Jie Hu, Yang Gong, Lin Wang, Wan Zhou, XiuJun Li, Feng Xu*, “A smartphone-based on-site nucleic acid testing platform at point-of-care settings,” Electrophoresis, 40: 914-921, 2019, DOI: 10.1002/elps.201800449
  • Chan Wen, Cheng Pei*, Xiayu Xu, Jianqin Lei*, “Influence of axial length on parafoveal and peripapillary metrics from swept source optical coherence tomography angiography,” Current Eye Research, 44(9): 980-986, 2019, DOI: 10.1080/02713683.2019.1607393
  • Peilin Lv, Jingni Yu, Xiayu Xu, Tianjian Lu*, Feng Xu*, “Eriodictyol inhibits high glucose-induced oxidative stress and inflammation in retinal ganglial cells,” Journal of Cellular Biochemistry, 120(4):5644-5651, 2019, DOI: 10.1002/jcb.27848
  • Xiayu Xu, Rendong Wang, Peilin Lv, Bin Gao, Chan Li, Zhiqiang Tian, Tao Tan, Feng Xu*, “Simultaneous arteriole and venule segmentation with domain-specific loss function on a new public database,” Biomedical Optics Express, 9(7):1-14, 2018, DOI: 10.1364/boe.9.003153 [data: REVEAL]
  • Dongsheng Jiang, Weiqiang Dou, Luc Vosters, Xiayu Xu, Yue Sun, Tao Tan*, “Denoising of 3D magnetic resonance images with multichannel,” Japanese Journal of Radiology, 36(9):566-574, 2018, DOI: 10.1007/s11604-018-0758-8
  • Jianqin Lei, Enhui Yi, Yan Suo, Cheng Chen, Xiayu Xu, Wenxiang Ding, Nizar Saleh Abdelfattah, Xiaojuan Fan, Huiqin Lu*, “Distinctive analysis of macular superficial capillaries and large vessels using optical coherence tomographic angiography in healthy and diabetic eyes,” Investigative Ophthalmology &Visual Science, 59(5):1937-1943, 2018, DOI: 10.1167/iovs.17-23676
  • Xiayu Xu, Wenxiang Ding, Michael D. Abramoff, Ruofan Cao*, “An improved arteriovenous classification method for the early diagnostics of various diseases in retinal image,” Computer Methods and Programs in Biomedicine, 141: 3-9, 2017, DOI: 10.1016/j.cmpb.2017.01.007
  • 李聪慧，曹若凡，许夏瑜，李菲，张镇西，徐峰，无透镜显微成像技术在即时检测中的应用进展，中国激光，2017，DOI: 10.3788/CJL201845.0207018
  • Xiayu Xu, Wenxiang Ding, Xuemin Wang, Ruofan Cao, Maiye Zhang, Peilin Lv, Feng Xu*, “Smartphone-based accurate analysis of retinal vasculature towards point-of-care diagnostics,” Scientific Reports, 6(34603), 2016, DOI: 10.1038/srep34603
  • Jie Hu, Xingye Cui, Yan Gong, Xiayu Xu, Bin Gao, Ting Wen, Tian Jian Lu, Feng Xu*, “Portable microfluidic and smartphone-based devices for monitoring of cardiovascular diseases at the point of care,” Biotechnology Advances, 34(3):305-320, 2016, DOI: 10.1016/j.biotechadv.2016.02.008
  • 曹雷，许夏瑜，高彬，李世超，文婷，李莹辉，卢天健，徐峰，绝对定量的多聚酶链式反应技术的发展现状及其生物医学应用，中国科学:生命科学（Science China: Life Science），46:809–826，2016
  • Xiayu Xu, Kyungmoo Lee, Li Zhang, Milan Sonka, Michael D. Abràmoff*, “Stratified sampling voxel classification for segmentation of intraretinal and subretinal fluid in longitudinal clinical OCT data,” IEEE Transactions on Medical Imaging, 34(7): 1616-1623, 2015, DOI: 10.1109/TMI.2015.2408632
  • Xiayu Xu, Altug Akay, Huilin Wei, Shuqi Wang, Belinda Pingguan-Murphy, Björn-Erik Erlandsson, XiuJun Li, Won Gu Lee, Jie Hu, Lin Wang, Feng Xu*, “Advances in smartphone-based point-of-care diagnostics,” Proceedings of the IEEE, 103(2): 236-247, 2015, DOI: 10.1109/JPROC.2014.2378776
  • Xiayu Xu, Joseph M. Reinhardt, Qiao Hu, Benjamin Bakall, Paul S. Tlucek, Geir Bertelsen, and Michael D. Abràmoff, “Retinal Vessel Width Measurement at Branchings using An Improved Electric Field Theory-Based Graph Approach,” PLoS ONE, 7(11): e49668, 2012
  • Xiayu Xu, Meindert Niemeijer, Qi Song, Milan Sonka, Mona K. Garvin, Joseph M. Reinhardt, Michael D. Abràmoff, “Vessel Boundary Delineation on Fundus Images using Graph-Based Approach,” IEEE Trans. on Medical Imaging, 30(6): 1184-91, 2011
  • Meindert Niemeijer, Xiayu Xu, Alina V. Dumitrescu, Priya Gupta, Bram van Ginneken, James C. Folk, Michael D. Abràmoff, “Automated Measurement of the Arteriolar-to-Venular Width Ratio in Digital Color Fundus Photographs,” IEEE Trans. on Medical Imaging, 30(11): 1941-50, 2011